Early Growth Performance of In Vitro Raised Melia volkensii Gürke Plantlets in Response to Beneficial Microorganisms under Semi-Arid Conditions.

Before in vitro propagated Melia volkensii plants can be used for mass planting, the transition phase to in vivo conditions needs to be better controlled because too many plants are lost during acclimatization and in the field. Two experiments were set up to evaluate the effects of biological agents on the establishment of M. volkensii in vitro plantlets. The biological agents consisted of Trichotech®, Bio-cure B®, Rhizatech®, Bacillus subtilis, a Trichoderma isolate and self-isolated native arbuscular mycorrhizal fungi (AMF). Regarding the latter, in soil from the nursery, the number of AMF spores increased from six spores to 400 per 100 g of soil using a trap culture, in which thirteen AMF morphotypes were identified and root colonization assessed through observation of hyphae, vesicles, coils and appressoria. The first experiment was set up in the greenhouse to investigate the efficacy of the biological agents on the hardening off. In the second, a field experiment was set up to study their effect on the early establishment of the plantlets in the field compared to seedlings. All biological agents significantly (p ≤ 0.05) improved in vitro plant survival and growth compared to the control. The highest plant height and number of leaves per plant were recorded in plants treated with Rhizatech®, Native AMF, Bio-cure B® and Trichoderma isolate. The treatments with Rhizatech®, Bio-cure B® and native mycorrhiza recorded a significantly wider stem. The root diameter of the plants treated with Rhizatech® and Bio-cure B® was the largest, but the plants inoculated with the native AMF had the longest roots. Moreover, the inoculated plants generally developed multiple secondary roots. After two months, AMF had clearly colonized the acclimatized plantlets. In the field experiment, the biologicals made no difference in survival rate but did produce a significantly larger leaf area after two months, with the largest leaves recorded with Rhizatech®, native AMF and Trichotech®. They also increased the quality index of the plants from 0.21 to 0.52. The performance of in vitro grown M. volkensii plants six months after planting in semi-arid conditions in Kiambere was better than that of seedlings. Inoculation of plants increased plant height and diameter. Thus, inoculation of biological agents is an efficient approach for improving the early growth of in vitro propagated M. volkensii plants.

Metagenomic analyses and genetic diversity of Tomato leaf curl Arusha virus affecting tomato plants in Kenya.

BACKGROUND: Tomato production is threatened worldwide by the occurrence of begomoviruses which are associated with tomato leaf curl diseases. There is little information on the molecular properties of tomato begomoviruses in Kenya, hence we investigated the population and genetic diversity of begomoviruses associated with tomato leaf curl in Kenya. METHODS: Tomato leaf samples with virus-like symptoms were obtained from farmers' field across the country in 2018 and Illumina sequencing undertaken to determine the genetic diversity of associated begomoviruses. Additionally, the occurrence of selection pressure and recombinant isolates within the population were also evaluated. RESULTS: Twelve complete begomovirus genomes were obtained from our samples with an average coverage of 99.9%. The sequences showed 95.7-99.7% identity among each other and 95.9-98.9% similarities with a Tomato leaf curl virus Arusha virus (ToLCArV) isolate from Tanzania. Analysis of amino acid sequences showed the highest identities in the regions coding for the coat protein gene (98.5-100%) within the isolates, and 97.1-100% identity with the C4 gene of ToLCArV. Phylogenetic algorithms clustered all Kenyan isolates in the same clades with ToLCArV, thus confirming the isolates to be a variant of the virus. There was no evidence of recombination within our isolates. Estimation of selection pressure within the virus population revealed the occurrence of negative or purifying selection in five out of the six coding regions of the sequences. CONCLUSIONS: The begomovirus associated with tomato leaf curl diseases of tomato in Kenya is a variant of ToLCArV, possibly originating from Tanzania. There is low genetic diversity within the virus population and this information is useful in the development of appropriate management strategies for the disease in the country.

The Phytochemical Composition of Melia volkensii and Its Potential for Insect Pest Management.

Due to potential health and environmental risks of synthetic pesticides, coupled with their non-selectivity and pest resistance, there has been increasing demand for safer and biodegradable alternatives for insect pest management. Botanical pesticides have emerged as a promising alternative due to their non-persistence, high selectivity, and low mammalian toxicity. Six Meliaceae plant species, Azadirachta indica, Azadirachta excelsa, Azadirachta siamens, Melia azedarach, Melia toosendan, and Melia volkensii, have been subject to botanical pesticide evaluation. This review focuses on Melia volkensii, which has not been intensively studied. M. volkensii, a dryland tree species native to East Africa, has shown activity towards a broad range of insect orders, including dipterans, lepidopterans and coleopterans. Its extracts have been reported to have growth inhibiting and antifeedant properties against Schistocerca gregaria, Trichoplusia ni, Pseudaletia unipuncta, Epilachna varivestis, Nezara viridula, several Spodoptera species and other insect pests. Mortality in mosquitoes has also been reported. Several limonoids with a wide range of biological activities have been isolated from the plant, including volkensin, salannin, toosendanin, trichilin-class limonoids, volkendousin, kulactone among others. This paper presents a concise review of published information on the phytochemical composition and potential of M. volkensii for application in insect pest management.

Spatial Distribution of Bactrocera dorsalis and Thaumatotibia leucotreta in Smallholder Avocado Orchards along Altitudinal Gradient of Taita Hills and Mount Kilimanjaro.

Avocado (Persea americana) fruits are an important source of income and a nutritious food for small-scale growers and other stakeholders involved in farming along the Afrotropical highlands of Taita Hills and Mount Kilimanjaro in Kenya and Tanzania, respectively. Avocado fruits are infested by several insect pests, namely the Asian invasive fruit fly, Bactrocera dorsalis (Hendel) (Diptera: Tephritidae), and the false codling moth, Thaumatotibia leucotreta Meyrick (Lepidoptera: Tortricidae). However, there is inadequate information on the distribution patterns of these pests in small-scale avocado cropping systems in the East African highlands. This study was initiated to generate a spatial distribution map of B. dorsalis and T. leucotreta in avocado orchards at Taita Hills and Mount Kilimanjaro in Kenya and Tanzania, respectively. The two pests were monitored by using their respective parapheromone lures for two years between August 2012 and July 2014. Fruit damage was assessed by computing the proportion of infested fruits for B. dorsalis, whereas the damage score was used for T. leucotreta. Our results indicated that the mean number of B. dorsalis per trap per day differed significantly across elevation, being highest in lowland zone for both Taita Hills (15.90) and Mount Kilimanjaro (24.45). Similarly, the percentage infestation of ground collected fruits by B. dorsalis varied with altitude, being lowest at highlands above 1500 m.a.s.l. (0.66% and 0.83% for Taita Hills and Mount Kilimanjaro, respectively). Conversely, the mean number of T. leucotreta did not vary with altitude in either study area. However, the damage score for T. leucotreta infestation was significantly lower in the highlands of both transects (7.0% and11.1% for Taita Hills and Mount Kilimanjaro, respectively). These findings describe spatial trends that are important in formulating strategies aimed at suppressing the populations of B. dorsalis and T. leucotreta in East African avocado cropping systems.

Datasets on abundance of common blossom thrips and weather variables in small-scale avocado orchards at Taita Hills and Mount Kilimanjaro.

Avocado, Persea americana Miller (Lauraceae), is an important fruit crop cultivated by small-holder farmers along Afrotropical highlands of Taita Hills in South-eastern Kenya and Mount Kilimanjaro in Northern Tanzania. The small-holder farmers in these East African regions generate substantial food and cash from avocado fruits. However, the avocado crop is faced with challenges of infestation by insect pests such as the common blossom thrips (Frankliniella schultzei Trybom) which feeds on pollen and floral tissue thereby reducing productivity of the trees. Moreover, there is no information describing distribution patterns of Frankliniella schultzei and associated weather in East African avocado orchards despite the fact that small-scale farming is dependent on rainfall. This article was, therefore, initiated to provide dataset on abundance of Frankliniella schultzei from the avocado plants that relates with monthly rainfall and air temperatures at Taita Hills and Mount Kilimanjaro. Frankliniella schultzei was collected using white coloured beating tray and camel brush whereas air temperatures (°C) and rainfall (mm) was recorded daily using automatic data loggers and rain gauge, respectively. The survey at the two transects commenced during peak flowering season of avocado crop in August up to end of harvesting period in July of the following year. Temporal datasets were generated by Kruskal-Wallis Chi-square test. Current temporal datasets presents strong baseline information specifically for Kenya and Tanzania government agencies to develop further agricultural strategies aimed at improving avocado farming within Taita Hills and Mount Kilimanjaro agro-ecosystems.

Molecular characterization of 'Candidatus Liberibacter' species/strains causing huanglongbing disease of citrus in Kenya

This study was undertaken to characterize the alpha subgroup of the proteobacteria causing the huanglongbing (HLB) disease of citrus from three different ecological zones of Kenya namely the Lower highlands (LH2, LH3, 1800-1900 m above sea level); Upper midlands (UM3, UM4, 1390-1475m), Lower midlands (LM5, LM4, LM3 of 1290-1340-1390m), by isolation and sequencing DNA encoding the L10 and L12 ribosomal proteins and the intergenic region. A 7I6-basepair DNA fragment was amplified and sequenced and consisted of 536 basepairs of DNA encoding the L10 protein, 44 basepairs of DNA intergenic region and 136 basepairs of DNA that partially encodes the L12 protein. Sequences of rpL10/L12 protein genes from Kenyan strains were 98 percent and 81 percent similar to the South African 'Candidatus Liberibacter africanus strain Nelspruit' and the Asian 'Candidatus Liberibacter asiaticus' strains, respectively. The intergenic rDNA sequence of Kenyan strain from UM and LM showed 84 percent similarity with 'Candidatus L. africanus strain Nelspruit' and 50 percent similarity with 'Candidatus L. asiaticus' strain. However, the LH strain had an 11- basepairs deletion, while the LM4 had a 5-basepair deletion in the intergenic region compared to 'Candidatus L. africanus strain Nelspruit'. The L10 amino acid sequence was 100 percent homologous among HLB bacteria obtained from the agro-ecological zones in Kenya and the L10 protein sequence was also homologus to 'Candidatus L. africanus strain Nelspruit'. Nevertheless, the L10 amino acid sequence of 'Candidatus L. asiaticus' and the 'Candidatus L. africanus subsp. capensis' differed from the Kenyan strains by 18.36 percent and 11.82 percent, respectively. Phylogenetic analysis of both the L10/L12 rDNA sequences and the L10 amino acid sequences clustered the Kenyan strains of the 'Candidatus Liberibacter' species with members of alpha subdivision of proteobacteria.